Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs72841129 chr2:70410527 C/G 2.43E-6 279 25.37 30.33 10.83 KM Plot
KIRP rs72841130 chr2:70412557 A/G 2.43E-6 280 25.23 30.33 10.83 KM Plot
KIRP rs72843784 chr6:26498758 G/T 1.66E-8 287 25.57 29.67 9.77 KM Plot
KIRP rs72845046 chr6:27575268 T/A 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs72845070 chr6:27668300 A/C 4.46E-9 285 25.58 29.77 9.77 KM Plot
KIRP rs72846780 chr6:28119055 T/C 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs72846794 chr6:28137499 G/A 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs72847313 chr6:27730082 C/T 1.3E-8 288 25.6 28.68 9.77 KM Plot
KIRP rs72854513 chr6:28265954 A/T 1.38E-8 289 25.6 26.4 9.77 KM Plot
KIRP rs72858833 chr17:79631074 C/T 4.33E-7 277 25.67 22.23 10.7 KM Plot
KIRP rs72872907 chr1:26598041 A/G 4.27E-5 285 25.58 30.92 16.23 KM Plot
KIRP rs72872912 chr1:26609093 A/T 2.45E-6 286 25.62 29.77 14.38 KM Plot
KIRP rs72929591 chr6:72692811 C/T 1.25E-9 287 26.4 22.7 9 KM Plot
KIRP rs72929594 chr6:72694176 A/G 1.02E-9 288 26.37 23.77 9 KM Plot
KIRP rs72938315 chr2:204121063 C/G 0.000198 282 26.37 25.43 3.73 KM Plot